STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_10100COG0640 Predicted transcriptional regulators. (330 aa)    
Predicted Functional Partners:
ELI_10095
COG0685 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
 
   
 0.870
ELI_10090
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
     
 0.844
ELI_10080
5-methyltetrahydrofolate-homocysteine methyltransferase; COG1410 Methionine synthase I, cobalamin-binding domain.
     
 0.822
ELI_10085
GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
     
 0.787
ELI_10105
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
    0.592
ELI_07070
COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
   
 
 0.505
ELI_04545
Hydrolase; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
  
 0.502
ELI_00205
Hypothetical protein.
  
     0.501
ELI_10075
COG0404 Glycine cleavage system T protein (aminomethyltransferase).
     
 0.501
ELI_02155
Putative thioredoxin reductase; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
  
 0.495
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.