STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_11145COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (577 aa)    
Predicted Functional Partners:
ELI_06870
AMP-binding enzyme domain protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
     0.933
ELI_14075
Serine palmitoyltransferase; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.
 
 0.806
ELI_11140
Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.
 
   
 0.774
ELI_10210
Hypothetical protein.
  
     0.746
ELI_12580
Hypothetical protein.
  
     0.709
ELI_11720
Putative 4-coumarate:CoA ligase 2; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
    
0.687
ELI_12585
Hypothetical protein; COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
  
   
 0.660
ELI_11135
Hypothetical protein.
       0.656
ELI_14080
COG0236 Acyl carrier protein.
 
 
 0.656
ELI_01865
COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
 
 
 0.645
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.