STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_12705Hypothetical protein. (67 aa)    
Predicted Functional Partners:
ELI_12700
Peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
       0.820
ELI_00125
Hypothetical protein; COG0001 Glutamate-1-semialdehyde aminotransferase.
  
   
 0.766
ELI_13475
Hypothetical protein.
  
     0.750
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.747
ELI_12695
Hypothetical protein.
 
     0.733
ELI_05710
Hypothetical protein.
  
     0.608
ELI_08830
Hypothetical protein.
  
     0.604
ELI_01190
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
     0.574
ELI_03650
COG0642 Signal transduction histidine kinase.
  
     0.564
ELI_14115
Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.552
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.