STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_12770Hypothetical protein. (123 aa)    
Predicted Functional Partners:
ELI_12755
Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
       0.773
ELI_12760
ABC transporter, ATP-binding protein; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
       0.773
ELI_12765
Hypothetical protein.
       0.773
ELI_12775
Hypothetical protein; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32).
       0.773
ELI_12780
Hypothetical protein; COG0441 Threonyl-tRNA synthetase.
       0.773
ELI_12785
COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
       0.773
ELI_12790
COG1959 Predicted transcriptional regulator.
       0.773
ELI_12795
Hypothetical protein; COG0180 Tryptophanyl-tRNA synthetase.
       0.518
ELI_12740
Hypothetical protein; Belongs to the HesB/IscA family.
       0.511
ELI_12745
COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
       0.511
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.