STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_12915COG1538 Outer membrane protein. (489 aa)    
Predicted Functional Partners:
ELI_12910
COG2518 Protein-L-isoaspartate carboxylmethyltransferase.
     
 0.824
ELI_04500
Heavy metal RND efflux membrane fusion protein, CzcB family protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.785
ELI_12920
COG3827 Uncharacterized protein conserved in bacteria.
       0.775
ELI_13485
HlyD family secretion protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.739
bamA
Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
   
 0.732
ELI_15015
Putative hlyD family multidrug secretion protein; COG1566 Multidrug resistance efflux pump.
 
 
 0.718
ELI_09025
ATP-binding protein of ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
  
 0.715
ELI_13490
Hypothetical protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.704
ELI_04440
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.673
ELI_11045
COG0845 Membrane-fusion protein.
  
 
 0.634
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.