Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ77023.1 | EAQ78570.1 | DSM3645_13328 | DSM3645_26844 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Putative pyridine nucleotide-disulphide oxidoreductase. | 0.823 |
| EAQ77023.1 | EAQ81349.1 | DSM3645_13328 | DSM3645_23196 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Putative secreted protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division. | 0.823 |
| EAQ77023.1 | EAQ82055.1 | DSM3645_13328 | DSM3645_00035 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. | 0.977 |
| EAQ77023.1 | EAQ82056.1 | DSM3645_13328 | DSM3645_00040 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. | 0.823 |
| EAQ77023.1 | EAQ82057.1 | DSM3645_13328 | DSM3645_00045 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit. | 0.974 |
| EAQ77023.1 | EAQ82459.1 | DSM3645_13328 | DSM3645_08677 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | NADH-dependant oxidoreductase-like protein. | 0.823 |
| EAQ77023.1 | EAQ82669.1 | DSM3645_13328 | DSM3645_09727 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. | 0.823 |
| EAQ77023.1 | fumC | DSM3645_13328 | DSM3645_09182 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Fumarate hydratase FumC; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.493 |
| EAQ77023.1 | sucC | DSM3645_13328 | DSM3645_13046 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | succinyl-CoA synthetase (beta subunit); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.565 |
| EAQ77023.1 | sucD | DSM3645_13328 | DSM3645_13051 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Putative succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.824 |
| EAQ78570.1 | EAQ77023.1 | DSM3645_26844 | DSM3645_13328 | Putative pyridine nucleotide-disulphide oxidoreductase. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.823 |
| EAQ78570.1 | EAQ81349.1 | DSM3645_26844 | DSM3645_23196 | Putative pyridine nucleotide-disulphide oxidoreductase. | Putative secreted protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division. | 0.757 |
| EAQ78570.1 | EAQ82055.1 | DSM3645_26844 | DSM3645_00035 | Putative pyridine nucleotide-disulphide oxidoreductase. | COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. | 0.977 |
| EAQ78570.1 | EAQ82057.1 | DSM3645_26844 | DSM3645_00045 | Putative pyridine nucleotide-disulphide oxidoreductase. | COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit. | 0.977 |
| EAQ78570.1 | fumC | DSM3645_26844 | DSM3645_09182 | Putative pyridine nucleotide-disulphide oxidoreductase. | Fumarate hydratase FumC; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.774 |
| EAQ78570.1 | sucC | DSM3645_26844 | DSM3645_13046 | Putative pyridine nucleotide-disulphide oxidoreductase. | succinyl-CoA synthetase (beta subunit); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.792 |
| EAQ78570.1 | sucD | DSM3645_26844 | DSM3645_13051 | Putative pyridine nucleotide-disulphide oxidoreductase. | Putative succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.779 |
| EAQ81349.1 | EAQ77023.1 | DSM3645_23196 | DSM3645_13328 | Putative secreted protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.823 |
| EAQ81349.1 | EAQ78570.1 | DSM3645_23196 | DSM3645_26844 | Putative secreted protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division. | Putative pyridine nucleotide-disulphide oxidoreductase. | 0.757 |
| EAQ81349.1 | EAQ82055.1 | DSM3645_23196 | DSM3645_00035 | Putative secreted protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division. | COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. | 0.977 |
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