STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82083.1Sugar ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component. (452 aa)    
Predicted Functional Partners:
EAQ82082.1
COG1175 ABC-type sugar transport systems, permease components.
 0.998
EAQ82084.1
COG0395 ABC-type sugar transport system, permease component.
 
 0.998
EAQ79782.1
ABC transporter related protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.978
EAQ82081.1
Hypothetical protein.
       0.565
EAQ77380.1
COG4813 Trehalose utilization protein.
 
     0.527
EAQ82852.1
Carbohydrate kinase, FGGY family protein; COG1070 Sugar (pentulose and hexulose) kinases.
 
     0.521
EAQ81336.1
Putative melibiase; COG3345 Alpha-galactosidase.
 
  
 0.451
EAQ80653.1
Putative oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.412
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.