STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82093.1COG1233 Phytoene dehydrogenase and related proteins. (557 aa)    
Predicted Functional Partners:
EAQ81153.1
Probable phytoene synthase; COG1562 Phytoene/squalene synthetase.
  
 
 0.765
EAQ81154.1
Phytoene synthase-related protein; COG1562 Phytoene/squalene synthetase.
  
 
 0.765
EAQ82078.1
COG3321 Polyketide synthase modules and related proteins.
  
 
 0.733
EAQ82323.1
Deoxyribonuclease gamma (precursor).
  
     0.569
EAQ80493.1
Deoxyribonuclease gamma (precursor).
  
     0.565
EAQ82094.1
Hypothetical protein.
       0.538
EAQ77526.1
NHL repeat protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.535
EAQ79816.1
Putative sarcosine oxidase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
    0.534
EAQ82239.1
Hypothetical protein; COG3239 Fatty acid desaturase.
 
  
 0.525
EAQ82092.1
COG3119 Arylsulfatase A and related enzymes.
       0.508
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.