STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82103.1Hypothetical protein; COG1716 FOG: FHA domain. (229 aa)    
Predicted Functional Partners:
EAQ79786.1
PAS protein; COG0642 Signal transduction histidine kinase.
  
 
 0.911
EAQ80865.1
Sensor histidine kinase/response regulator; COG0784 FOG: CheY-like receiver.
  
 
 0.866
EAQ78184.1
Two-component sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
  
 
 0.784
ribBA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.733
EAQ81194.1
COG0004 Ammonia permease.
  
 
  0.724
EAQ80186.1
Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase A, N-terminal:Hpt; COG0642 Signal transduction histidine kinase.
  
 
  0.723
EAQ79051.1
Sensory box sensor histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
  
 
  0.717
EAQ80514.1
FOG: CheY-like receiver; COG0642 Signal transduction histidine kinase.
  
 
  0.717
EAQ77240.1
Probable response regulatory protein; COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
 
  
  0.689
EAQ79643.1
Hypothetical protein; COG1716 FOG: FHA domain.
  
     0.684
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.