STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82152.1Hypothetical protein. (344 aa)    
Predicted Functional Partners:
EAQ82151.1
Hypothetical protein.
 
     0.887
EAQ82154.1
Unknown conserved protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
  0.873
EAQ78253.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.767
EAQ79212.1
Hypothetical protein.
  
     0.762
EAQ81182.1
Hypothetical protein.
  
     0.759
EAQ78770.1
Hypothetical protein.
  
     0.757
EAQ77671.1
L-sorbosone dehydrogenase-like protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.755
EAQ79147.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.740
EAQ76833.1
Hypothetical protein.
  
     0.726
EAQ78614.1
Azurin precursor-like protein; COG2133 Glucose/sorbosone dehydrogenases.
 
     0.725
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.