STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82203.1Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. (488 aa)    
Predicted Functional Partners:
EAQ78260.1
COG0631 Serine/threonine protein phosphatase.
 
  0.847
EAQ82204.1
Probable extracytoplasmic function alternative sigma factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
   
   0.795
EAQ82042.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
 
  
 0.752
EAQ80865.1
Sensor histidine kinase/response regulator; COG0784 FOG: CheY-like receiver.
    
 0.746
EAQ80410.1
PAS protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
    
 0.712
EAQ77547.1
Tyrosine protein kinase:WD-40 repeat:Serine/threonine protein kinase; COG2319 FOG: WD40 repeat.
 
      0.701
EAQ80186.1
Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase A, N-terminal:Hpt; COG0642 Signal transduction histidine kinase.
 
  
 0.663
EAQ79051.1
Sensory box sensor histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
 
  
 0.659
EAQ80514.1
FOG: CheY-like receiver; COG0642 Signal transduction histidine kinase.
 
  
 0.656
EAQ79786.1
PAS protein; COG0642 Signal transduction histidine kinase.
    
 0.654
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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