STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ77668.1Probable deca-heme c-type cytochrome; COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit. (814 aa)    
Predicted Functional Partners:
EAQ77336.1
Hypothetical protein; COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit.
 
 0.939
EAQ77700.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 
 0.844
EAQ82042.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
    
 0.835
EAQ80410.1
PAS protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
    
 0.779
EAQ78049.1
Methyl-accepting chemotaxis receptor/sensory transducer; COG2202 FOG: PAS/PAC domain.
    
  0.764
EAQ81108.1
Aryl-sulfate sulphohydrolase; COG3119 Arylsulfatase A and related enzymes.
  
     0.730
EAQ82784.1
Nonspecific acid phosphatase precursor.
  
    0.722
ribBA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.712
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.671
EAQ80976.1
Sensor histidine kinase, putative; COG0642 Signal transduction histidine kinase.
    
  0.653
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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