STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulose kinase; COG1070 Sugar (pentulose and hexulose) kinases. (508 aa)    
Predicted Functional Partners:
xylA
COG2115 Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.986
EAQ82200.1
COG0036 Pentose-5-phosphate-3-epimerase.
 
  
 0.966
EAQ78942.1
Hypothetical protein; COG2382 Enterochelin esterase and related enzymes.
  
 
 0.716
EAQ77685.1
COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog.
       0.678
EAQ82078.1
COG3321 Polyketide synthase modules and related proteins.
  
 
 0.639
EAQ76988.1
L-fuculose-phosphate aldolase; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
 
 0.637
EAQ80862.1
COG0021 Transketolase; Belongs to the transketolase family.
  
 
 0.616
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
0.588
EAQ79657.1
Putative carbohydrate kinase; COG1069 Ribulose kinase.
 
 
0.585
EAQ77683.1
Putative ABC transporter solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.553
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.