STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ79251.1MchE protein-like; COG0845 Membrane-fusion protein. (465 aa)    
Predicted Functional Partners:
EAQ79250.1
Cation efflux system protein, AcrB/AcrD/AcrF family protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.858
EAQ81963.1
COG1538 Outer membrane protein.
  
  0.801
EAQ77476.1
Probable ferredoxin MJ0251-putative Fe-S containing oxidoreductase; COG1146 Ferredoxin.
  
     0.752
EAQ81772.1
COG1538 Outer membrane protein.
  
  0.722
EAQ82341.1
Serine/threonine protein kinase related protein-like; COG1520 FOG: WD40-like repeat.
  
     0.678
EAQ80255.1
Probable MucD-putative a secreted serine proteinase; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.670
EAQ78129.1
Probable beta-subunit of geranylgeranyltransferase or farnesyltransferase; COG5029 Prenyltransferase, beta subunit.
  
     0.663
EAQ81097.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
     0.663
EAQ80615.1
Cation efflux system protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.657
EAQ78123.1
Polyprenyl synthetase.
  
     0.647
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.