STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ79981.1Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins. (661 aa)    
Predicted Functional Partners:
EAQ79899.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.694
EAQ81145.1
Surface protein-like.
  
 
   0.669
EAQ80972.1
Hypothetical protein.
  
 
   0.653
EAQ78308.1
Probable vegetatible incompatibility protein.
  
     0.605
EAQ81146.1
Probable serine proteinase, subtilase family protein.
  
     0.598
EAQ79119.1
S-layer related protein-like; COG5492 Bacterial surface proteins containing Ig-like domains.
  
 
   0.575
EAQ80973.1
COG3006 Uncharacterized protein involved in chromosome partitioning.
  
     0.559
EAQ79667.1
Probable S-layer related protein (precursor).
  
 
   0.549
EAQ80739.1
Hypothetical protein; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32).
  
     0.532
EAQ81148.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.511
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.