STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ80094.1Polydom protein-like (pentaxin domain). (536 aa)    
Predicted Functional Partners:
EAQ82122.1
Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); COG2755 Lysophospholipase L1 and related esterases.
  
 0.794
EAQ78926.1
Cyclic beta 1-2 glucan synthetase; COG3459 Cellobiose phosphorylase.
     
 0.763
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.758
EAQ80095.1
Probable ECF sigma factor (sigma-70 family protein); COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.747
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.724
EAQ77936.1
Competence-damage inducible protein CinA; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
    
  0.723
EAQ79259.1
Hypothetical protein.
   
    0.641
EAQ77099.1
COG2340 Uncharacterized protein with SCP/PR1 domains.
   
    0.641
EAQ82550.1
Hypothetical protein; COG1292 Choline-glycine betaine transporter.
  
 
 0.479
EAQ79003.1
Hypothetical protein.
  
 
 0.465
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.