Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ77014.1 | EAQ78694.1 | DSM3645_13283 | DSM3645_07875 | Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases. | Hypothetical protein. | 0.577 |
EAQ78694.1 | EAQ77014.1 | DSM3645_07875 | DSM3645_13283 | Hypothetical protein. | Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases. | 0.577 |
EAQ78694.1 | EAQ78695.1 | DSM3645_07875 | DSM3645_07880 | Hypothetical protein. | Probable ferric enterobactin esterase-related protein Fes; COG2382 Enterochelin esterase and related enzymes. | 0.556 |
EAQ78694.1 | EAQ79694.1 | DSM3645_07875 | DSM3645_24335 | Hypothetical protein. | COG0640 Predicted transcriptional regulators. | 0.672 |
EAQ78694.1 | EAQ80302.1 | DSM3645_07875 | DSM3645_10672 | Hypothetical protein. | COG3865 Uncharacterized protein conserved in bacteria. | 0.679 |
EAQ78695.1 | EAQ78694.1 | DSM3645_07880 | DSM3645_07875 | Probable ferric enterobactin esterase-related protein Fes; COG2382 Enterochelin esterase and related enzymes. | Hypothetical protein. | 0.556 |
EAQ79694.1 | EAQ78694.1 | DSM3645_24335 | DSM3645_07875 | COG0640 Predicted transcriptional regulators. | Hypothetical protein. | 0.672 |
EAQ80302.1 | EAQ78694.1 | DSM3645_10672 | DSM3645_07875 | COG3865 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.679 |