STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82447.1Probable low molecular weight protein-tyrosine-phosphatase ywlE; COG0009 Putative translation factor (SUA5); Belongs to the SUA5 family. (380 aa)    
Predicted Functional Partners:
EAQ79936.1
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
   
 
 0.882
EAQ82446.1
Ribose 5-phosphate epimerase (pentose phosphate); COG0698 Ribose 5-phosphate isomerase RpiB.
   
  0.814
EAQ77858.1
O-sialoglycoprotein endopeptidase; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
 
  
 0.748
cysN
cysN/cysC bifunctionyal enzyme; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
 
 0.733
EAQ82078.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.731
truA
Pseudouridylate synthase (tRNA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
 
 0.725
tsaD
Glycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.718
EAQ77803.1
Hypothetical protein; COG0802 Predicted ATPase or kinase.
    
 0.714
EAQ79233.1
Acylglycerophosphoethanolamine acyltransferase; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.632
EAQ81555.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
 0.618
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.