STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82468.1Probable D-arabino 3-hexulose 6-phosphate formaldehyde. (165 aa)    
Predicted Functional Partners:
EAQ82469.1
MtdA bifunctional protein.
 
  
  0.994
ffsA
Tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
  
 0.979
glyA
Serine hydroxymethyltransferase (serine methylase SHMT); Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.912
EAQ82466.1
Hypothetical protein; COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase.
 
     0.848
mch
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
 
   
 0.845
EAQ77898.1
Hypothetical protein; COG1907 Predicted archaeal sugar kinases.
 
     0.805
EAQ81643.1
Hypothetical protein; COG1767 Triphosphoribosyl-dephospho-CoA synthetase.
 
     0.805
EAQ77104.1
COG2218 Formylmethanofuran dehydrogenase subunit C.
 
     0.799
EAQ77134.1
DNA/RNA non-specific endonuclease; COG1229 Formylmethanofuran dehydrogenase subunit A.
 
     0.798
EAQ81941.1
COG1029 Formylmethanofuran dehydrogenase subunit B.
 
     0.798
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.