STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82652.1BNR/Asp-box repeat protein; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor. (1021 aa)    
Predicted Functional Partners:
EAQ82653.1
Hypothetical protein; COG0164 Ribonuclease HII.
       0.754
EAQ77906.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.724
EAQ77629.1
Hypothetical protein; COG0443 Molecular chaperone.
  
     0.696
EAQ79125.1
Hypothetical protein; COG1450 Type II secretory pathway, component PulD.
 
     0.684
EAQ77476.1
Probable ferredoxin MJ0251-putative Fe-S containing oxidoreductase; COG1146 Ferredoxin.
  
     0.640
EAQ79823.1
COG0811 Biopolymer transport proteins.
  
     0.635
EAQ80616.1
MchE protein-like; COG0845 Membrane-fusion protein.
  
     0.611
EAQ82467.1
Hypothetical protein.
  
     0.604
EAQ82508.1
COG0627 Predicted esterase.
  
     0.600
EAQ78672.1
Hypothetical protein.
  
     0.595
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.