STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82710.1Hypothetical protein. (313 aa)    
Predicted Functional Partners:
EAQ80003.1
Hypothetical protein.
  
     0.729
EAQ82709.1
Hypothetical protein; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
       0.584
EAQ82708.1
Probable NADH-dependent dehydrogenase; COG0673 Predicted dehydrogenases and related proteins.
       0.485
EAQ82711.1
Xylose operon regulatory protein; COG1609 Transcriptional regulators.
       0.474
EAQ78869.1
Probable general secretion pathway protein K; COG3156 Type II secretory pathway, component PulK.
  
   0.432
EAQ82706.1
COG0693 Putative intracellular protease/amidase.
       0.424
EAQ82707.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
       0.424
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.