STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82829.1Hypothetical protein. (468 aa)    
Predicted Functional Partners:
cmk
COG0283 Cytidylate kinase.
  
  
 0.704
der
Probable GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.656
EAQ82323.1
Deoxyribonuclease gamma (precursor).
  
    0.645
EAQ80493.1
Deoxyribonuclease gamma (precursor).
  
    0.645
EAQ81093.1
Putative endonuclease/exonuclease/phosphatase family protein.
  
    0.645
EAQ81232.1
Hypothetical protein; COG0116 Predicted N6-adenine-specific DNA methylase.
  
 
 0.578
EAQ82830.1
COG1846 Transcriptional regulators.
       0.470
EAQ82636.1
Hypothetical protein; COG1386 Predicted transcriptional regulator containing the HTH domain.
  
  
 0.468
EAQ80713.1
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
  
 0.468
EAQ82831.1
Hypothetical protein.
       0.464
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.