STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82832.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
EAQ80220.1
PbrT protein-putative c-type cytochrome-like protein; COG2010 Cytochrome c, mono- and diheme variants.
 
     0.761
EAQ80214.1
Twin-arginine translocation pathway signal; COG0723 Rieske Fe-S protein.
  
     0.679
EAQ80216.1
Hypothetical protein; COG1290 Cytochrome b subunit of the bc complex.
 
     0.667
EAQ82831.1
Hypothetical protein.
       0.613
EAQ82830.1
COG1846 Transcriptional regulators.
       0.604
EAQ78030.1
Probable cytochrome c-554; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
  
     0.592
EAQ77019.1
COG2010 Cytochrome c, mono- and diheme variants.
  
     0.576
EAQ80215.1
Menaquinol-cytochrome C reductase; COG1290 Cytochrome b subunit of the bc complex.
  
     0.563
EAQ82833.1
Hypothetical protein.
 
    
0.538
EAQ82523.1
Hypothetical protein.
  
     0.490
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.