STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ80357.1COG0450 Peroxiredoxin. (197 aa)    
Predicted Functional Partners:
EAQ77555.1
Putative thioredoxin reductase; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
 
 0.901
EAQ77329.1
Probable catalase hydroperoxidase hpii oxidoreductase protein; COG0753 Catalase.
   
 
 0.748
EAQ80525.1
COG0753 Catalase; Belongs to the catalase family.
   
 
 0.748
EAQ77595.1
Hypothetical protein; COG2345 Predicted transcriptional regulator.
  
    0.665
EAQ78641.1
COG0492 Thioredoxin reductase.
  
 
 0.649
EAQ80480.1
COG0492 Thioredoxin reductase.
  
 
 0.649
EAQ79907.1
Putative secreted protein; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
 0.649
EAQ77051.1
Probable thioredoxin; COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog).
  
 0.649
EAQ77526.1
NHL repeat protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.640
EAQ77031.1
Putative lipoprotein/thioderoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.632
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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