STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ80428.1COG3455 Uncharacterized protein conserved in bacteria. (209 aa)    
Predicted Functional Partners:
EAQ80432.1
COG3517 Uncharacterized protein conserved in bacteria.
  
  
 0.897
EAQ80431.1
COG3516 Uncharacterized protein conserved in bacteria.
  
  
 0.840
EAQ80427.1
Hypothetical protein.
  
 
 0.826
EAQ80435.1
COG3519 Uncharacterized protein conserved in bacteria.
  
  
 0.787
EAQ82360.1
COG3501 Uncharacterized protein conserved in bacteria.
  
  
 0.634
EAQ80434.1
COG3518 Uncharacterized protein conserved in bacteria.
  
  
 0.633
EAQ80688.1
COG3522 Uncharacterized protein conserved in bacteria.
  
  
 0.594
EAQ80430.1
COG3515 Uncharacterized protein conserved in bacteria.
  
  
 0.593
EAQ80436.1
COG3520 Uncharacterized protein conserved in bacteria.
  
  
 0.569
EAQ80429.1
Hypothetical protein.
       0.560
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.