STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ80748.1COG0076 Glutamate decarboxylase and related PLP-dependent proteins; Belongs to the group II decarboxylase family. (465 aa)    
Predicted Functional Partners:
EAQ82078.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.955
EAQ78234.1
Glutamate synthase [NADPH] large chain; COG0067 Glutamate synthase domain 1.
    
 0.953
EAQ77408.1
P-protein (PheA); COG1605 Chorismate mutase.
    
 0.946
EAQ79138.1
COG3321 Polyketide synthase modules and related proteins.
  
 
 0.945
EAQ78958.1
5-oxoprolinase (ATP-hydrolyzing); COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
   
 
  0.917
EAQ80750.1
Hypothetical protein.
 
     0.839
EAQ77535.1
COG0506 Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.834
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.827
EAQ78987.1
Saframycin Mx1 synthetase B; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 0.815
EAQ81365.1
Saframycin Mx1 synthetase B; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 0.815
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.