STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ77175.1COG3386 Gluconolactonase. (322 aa)    
Predicted Functional Partners:
EAQ77674.1
Glucose dehydrogenase Gcd; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
 
  0.894
EAQ82089.1
Protein up-regulated by thyroid hormone-putative PQQ-dependent glucose dehydrogenase; COG2133 Glucose/sorbosone dehydrogenases.
 
   
  0.840
EAQ81803.1
Glucose dehydrogenase-B [pyrroloquinoline-quinone] precursor-like protein; COG2133 Glucose/sorbosone dehydrogenases.
  
  
  0.796
EAQ77261.1
Glucose dehydrogenase-B [pyrroloquinoline-quinone] precursor-like protein; COG2133 Glucose/sorbosone dehydrogenases.
  
  
  0.785
EAQ81246.1
COG3386 Gluconolactonase.
  
  
 
0.776
EAQ82295.1
Probable glucose 1-dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 
  0.770
EAQ78942.1
Hypothetical protein; COG2382 Enterochelin esterase and related enzymes.
  
  
 
0.727
EAQ80887.1
L-sorbosone dehydrogenase-like protein; COG2133 Glucose/sorbosone dehydrogenases.
    
  0.662
EAQ78614.1
Azurin precursor-like protein; COG2133 Glucose/sorbosone dehydrogenases.
  
  
  0.575
EAQ82714.1
Probable acetyl xylan esterase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.567
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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