STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ79056.1Probable pterin-4-alpha-carbinolamine dehydratase; COG2154 Pterin-4a-carbinolamine dehydratase. (119 aa)    
Predicted Functional Partners:
EAQ79055.1
Probable PKR inhibitor (translation regulation); COG0457 FOG: TPR repeat.
       0.654
EAQ76862.1
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
  
  
 0.593
EAQ82078.1
COG3321 Polyketide synthase modules and related proteins.
  
 
 0.497
EAQ79054.1
Probable serine/threonine protein kinase; COG1520 FOG: WD40-like repeat.
       0.444
EAQ77408.1
P-protein (PheA); COG1605 Chorismate mutase.
      
 0.420
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
 
   
 0.400
EAQ79053.1
COG2318 Uncharacterized protein conserved in bacteria.
       0.400
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.