STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ79098.1Pre-neck appendage protein-like; COG5434 Endopolygalacturonase. (448 aa)    
Predicted Functional Partners:
EAQ77228.1
Hypothetical protein; COG1657 Squalene cyclase.
 
  
 0.867
EAQ79663.1
Hypothetical protein.
  
  0.810
EAQ81403.1
Hypothetical protein.
  
     0.774
EAQ80359.1
Hypothetical protein; COG0206 Cell division GTPase.
  
     0.772
EAQ82758.1
Hypothetical protein; COG4692 Predicted neuraminidase (sialidase).
  
     0.770
EAQ81875.1
Hypothetical protein.
 
 
  0.768
EAQ82374.1
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
  
     0.749
EAQ77392.1
Hypothetical protein.
 
     0.748
EAQ80122.1
Hypothetical protein.
  
     0.748
EAQ78506.1
Hypothetical protein; COG4692 Predicted neuraminidase (sialidase).
 
     0.747
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.