Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ78055.1 | EAQ80661.1 | DSM3645_18581 | DSM3645_14985 | COG4409 Neuraminidase (sialidase). | COG3119 Arylsulfatase A and related enzymes. | 0.464 |
EAQ79149.1 | EAQ80661.1 | DSM3645_26039 | DSM3645_14985 | COG4409 Neuraminidase (sialidase). | COG3119 Arylsulfatase A and related enzymes. | 0.729 |
EAQ80399.1 | EAQ80661.1 | DSM3645_11157 | DSM3645_14985 | Hypothetical protein. | COG3119 Arylsulfatase A and related enzymes. | 0.462 |
EAQ80660.1 | EAQ80661.1 | DSM3645_14980 | DSM3645_14985 | COG1225 Peroxiredoxin. | COG3119 Arylsulfatase A and related enzymes. | 0.506 |
EAQ80661.1 | EAQ78055.1 | DSM3645_14985 | DSM3645_18581 | COG3119 Arylsulfatase A and related enzymes. | COG4409 Neuraminidase (sialidase). | 0.464 |
EAQ80661.1 | EAQ79149.1 | DSM3645_14985 | DSM3645_26039 | COG3119 Arylsulfatase A and related enzymes. | COG4409 Neuraminidase (sialidase). | 0.729 |
EAQ80661.1 | EAQ80399.1 | DSM3645_14985 | DSM3645_11157 | COG3119 Arylsulfatase A and related enzymes. | Hypothetical protein. | 0.462 |
EAQ80661.1 | EAQ80660.1 | DSM3645_14985 | DSM3645_14980 | COG3119 Arylsulfatase A and related enzymes. | COG1225 Peroxiredoxin. | 0.506 |