STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ77165.1Hypothetical protein. (246 aa)    
Predicted Functional Partners:
EAQ77166.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
    
  0.797
EAQ81180.1
Probable capsular polysaccharide biosynthesis glycosyltransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.573
EAQ81623.1
ABC transporter permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 0.494
EAQ81555.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
  
 0.468
EAQ77163.1
Iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit, putative; COG1035 Coenzyme F420-reducing hydrogenase, beta subunit.
       0.459
EAQ77164.1
Hypothetical protein; COG2171 Tetrahydrodipicolinate N-succinyltransferase.
       0.426
EAQ77167.1
Hypothetical protein.
       0.410
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.