STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78167.1Hypothetical protein; COG0538 Isocitrate dehydrogenases. (136 aa)    
Predicted Functional Partners:
EAQ78168.1
Probable integral membrane protein; COG2064 Flp pilus assembly protein TadC.
  
    0.841
EAQ78169.1
COG4965 Flp pilus assembly protein TadB.
  
    0.673
EAQ78171.1
Response regulator; COG4963 Flp pilus assembly protein, ATPase CpaE.
  
    0.669
EAQ78170.1
Secretory protein kinase; COG4962 Flp pilus assembly protein, ATPase CpaF.
  
    0.625
EAQ78166.1
Hypothetical protein.
       0.557
EAQ78165.1
Hypothetical protein.
       0.478
EAQ76933.1
COG3745 Flp pilus assembly protein CpaB.
  
    0.410
EAQ80144.1
COG3745 Flp pilus assembly protein CpaB.
  
    0.410
EAQ76931.1
Probable pilus assembly protein CpaE; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
    0.401
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.