STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78231.1Transcriptional repressor SmtB; COG0640 Predicted transcriptional regulators. (112 aa)    
Predicted Functional Partners:
EAQ78230.1
Cd/Co/Hg/Pb/Zn-translocating P-type ATPase; COG2217 Cation transport ATPase.
 
  
 0.862
EAQ78229.1
COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
  
 0.699
EAQ78232.1
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
       0.567
EAQ78957.1
COG0640 Predicted transcriptional regulators.
  
     0.522
EAQ77544.1
Hypothetical protein; COG2217 Cation transport ATPase.
  
  
 0.452
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.