STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78243.1Intracellular proteinase pfpI; COG0693 Putative intracellular protease/amidase. (202 aa)    
Predicted Functional Partners:
EAQ78242.1
Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases.
  
 
 0.815
EAQ77654.1
Putative oxidase; COG0277 FAD/FMN-containing dehydrogenases.
    
  0.682
EAQ80127.1
Putative oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
    
  0.682
EAQ79936.1
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
    
 0.588
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
   0.575
EAQ79161.1
COG2032 Cu/Zn superoxide dismutase.
   
 
 0.551
EAQ78244.1
COG3132 Uncharacterized protein conserved in bacteria; Belongs to the UPF0502 family.
       0.550
EAQ77329.1
Probable catalase hydroperoxidase hpii oxidoreductase protein; COG0753 Catalase.
  
  0.544
EAQ80525.1
COG0753 Catalase; Belongs to the catalase family.
  
  0.544
EAQ78444.1
Acetoin utilization protein; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
    
  0.534
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.