STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ81974.1COG1846 Transcriptional regulators. (163 aa)    
Predicted Functional Partners:
EAQ81975.1
COG1741 Pirin-related protein; Belongs to the pirin family.
       0.598
EAQ78830.1
Regulatory protein, MarR; COG1846 Transcriptional regulators.
  
     0.558
EAQ80191.1
Transcriptional regulator, MarR family protein; COG1846 Transcriptional regulators.
  
     0.555
EAQ79626.1
Transcriptional regulator, MarR family protein; COG1846 Transcriptional regulators.
  
     0.555
EAQ81976.1
SURF4 domain protein; COG2259 Predicted membrane protein.
       0.463
EAQ79231.1
ABC transporter permease protein; COG1174 ABC-type proline/glycine betaine transport systems, permease component.
  
  
 0.446
EAQ81973.1
Hypothetical protein; COG1716 FOG: FHA domain.
       0.405
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.