STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ81996.1COG0811 Biopolymer transport proteins. (289 aa)    
Predicted Functional Partners:
EAQ81167.1
COG0848 Biopolymer transport protein.
 
 
 0.883
EAQ77756.1
COG0848 Biopolymer transport protein.
 
 
 0.874
EAQ81997.1
COG1729 Uncharacterized protein conserved in bacteria.
 
    0.861
EAQ80330.1
COG0848 Biopolymer transport protein.
  
   0.814
EAQ78342.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 0.682
EAQ77644.1
COG0848 Biopolymer transport protein.
  
 
 0.673
EAQ82229.1
ABC transporter, ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
  
     0.641
EAQ77643.1
Biopolymer transport exbD2 protein-like.
  
   0.640
EAQ80181.1
Hypothetical protein.
  
   0.606
EAQ80182.1
COG0848 Biopolymer transport protein.
  
   0.600
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.