STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ82043.1Hypothetical protein; COG0467 RecA-superfamily ATPases implicated in signal transduction. (505 aa)    
Predicted Functional Partners:
EAQ80860.1
Sensory box histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 
 0.836
EAQ82098.1
PAS sensor signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 
 0.835
EAQ77210.1
COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase).
 
 
 
 0.834
EAQ77981.1
COG0642 Signal transduction histidine kinase.
 
 
 
 0.834
EAQ82042.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
  
  
 0.823
EAQ79786.1
PAS protein; COG0642 Signal transduction histidine kinase.
 
 
 
 0.785
EAQ78184.1
Two-component sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 
 0.762
EAQ77890.1
Response regulator receiver domain protein (CheY-like); COG0784 FOG: CheY-like receiver.
   
 
 0.685
EAQ81950.1
COG0642 Signal transduction histidine kinase.
   
 
 0.678
EAQ77775.1
COG0642 Signal transduction histidine kinase.
   
 
 0.637
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.