STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78282.1O-linked GlcNAc transferase-putative TPR repeat containing protein-like; COG0457 FOG: TPR repeat. (248 aa)    
Predicted Functional Partners:
EAQ82553.1
Probable O-linked GlcNAc transferase; COG2452 Predicted site-specific integrase-resolvase.
  
  
  0.772
EAQ82054.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
  
  0.720
ribBA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.711
EAQ82771.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
  
 0.697
EAQ77997.1
O-linked GlcNAc transferase; COG0457 FOG: TPR repeat.
  
  
  0.696
EAQ80148.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.683
EAQ77583.1
COG0457 FOG: TPR repeat.
  
  
  0.663
EAQ79055.1
Probable PKR inhibitor (translation regulation); COG0457 FOG: TPR repeat.
  
  
  0.656
EAQ81791.1
TPR repeat protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
  
  
  0.646
EAQ76926.1
Probable O-linked GlcNAc transferase; COG0457 FOG: TPR repeat.
  
  
  0.615
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.