STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78304.1Hypothetical protein; COG4587 ABC-type uncharacterized transport system, permease component. (165 aa)    
Predicted Functional Partners:
EAQ78303.1
Hypothetical protein; COG4587 ABC-type uncharacterized transport system, permease component.
      0.966
EAQ78305.1
Hypothetical protein; COG3694 ABC-type uncharacterized transport system, permease component.
 
  
 0.963
EAQ78302.1
ABC transporter, ATP-binding protein; COG4586 ABC-type uncharacterized transport system, ATPase component.
 
  
 0.940
EAQ80373.1
Probable thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.681
EAQ79775.1
Probable permease of ABC transporter; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.590
EAQ81778.1
Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component.
  
     0.571
EAQ82351.1
COG0457 FOG: TPR repeat.
  
     0.530
EAQ81097.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
     0.517
EAQ80177.1
COG1785 Alkaline phosphatase.
  
     0.491
EAQ78932.1
Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
  
     0.485
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.