STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78307.1Hypothetical protein; COG1520 FOG: WD40-like repeat. (429 aa)    
Predicted Functional Partners:
EAQ78308.1
Probable vegetatible incompatibility protein.
 
     0.815
EAQ78051.1
Hypothetical protein; COG1012 NAD-dependent aldehyde dehydrogenases.
  
  
  0.781
EAQ80836.1
Serine/threonine protein kinase related protein-like; COG1520 FOG: WD40-like repeat.
  
     0.775
EAQ78131.1
Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
     0.775
EAQ81757.1
Hypothetical protein; COG1541 Coenzyme F390 synthetase.
  
     0.774
EAQ79036.1
Probable hexosyltransferase; COG0438 Glycosyltransferase.
  
     0.771
EAQ78123.1
Polyprenyl synthetase.
  
     0.750
EAQ78129.1
Probable beta-subunit of geranylgeranyltransferase or farnesyltransferase; COG5029 Prenyltransferase, beta subunit.
  
     0.738
EAQ77476.1
Probable ferredoxin MJ0251-putative Fe-S containing oxidoreductase; COG1146 Ferredoxin.
  
     0.734
EAQ78122.1
Probable squalene-hopene cyclase; COG1657 Squalene cyclase.
  
     0.726
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.