STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ80181.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
EAQ80182.1
COG0848 Biopolymer transport protein.
 
     0.905
EAQ80180.1
COG0811 Biopolymer transport proteins.
 
   0.838
EAQ77644.1
COG0848 Biopolymer transport protein.
  
     0.709
EAQ80183.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.699
EAQ77755.1
COG0811 Biopolymer transport proteins.
  
   0.663
EAQ78342.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 0.653
EAQ81996.1
COG0811 Biopolymer transport proteins.
  
   0.606
EAQ79011.1
IRE (iron responsive element)-like protein; COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
  
 
 0.604
EAQ80179.1
Hypothetical protein.
       0.597
EAQ80178.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
       0.585
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.