STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ80182.1COG0848 Biopolymer transport protein. (141 aa)    
Predicted Functional Partners:
EAQ80181.1
Hypothetical protein.
 
     0.905
EAQ80180.1
COG0811 Biopolymer transport proteins.
 
   0.844
EAQ80183.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.731
EAQ79823.1
COG0811 Biopolymer transport proteins.
  
   0.691
EAQ80331.1
COG0848 Biopolymer transport protein.
  
     0.652
EAQ77755.1
COG0811 Biopolymer transport proteins.
  
   0.644
EAQ77644.1
COG0848 Biopolymer transport protein.
  
     0.631
EAQ80178.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.617
EAQ80329.1
COG0811 Biopolymer transport proteins.
  
   0.609
EAQ79011.1
IRE (iron responsive element)-like protein; COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
  
 
 0.604
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.