STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ80982.1COG1524 Uncharacterized proteins of the AP superfamily. (440 aa)    
Predicted Functional Partners:
EAQ80981.1
COG1082 Sugar phosphate isomerases/epimerases.
 
     0.902
EAQ80980.1
Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
   
 0.889
EAQ80246.1
Hypothetical protein.
 
   
 0.796
EAQ80245.1
Hypothetical protein; COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold.
 
   
 0.795
EAQ82378.1
Hypothetical protein.
 
   
 0.793
EAQ76861.1
COG1260 Myo-inositol-1-phosphate synthase.
 
     0.700
EAQ81803.1
Glucose dehydrogenase-B [pyrroloquinoline-quinone] precursor-like protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.659
EAQ78253.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.602
EAQ78291.1
Putative large multi-functional protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.590
EAQ77927.1
Probable large, multifunctional secreted protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.590
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.