STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ81027.1Hypothetical protein. (79 aa)    
Predicted Functional Partners:
EAQ81026.1
Hypothetical protein.
       0.545
EAQ81015.1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
    0.480
EAQ81107.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.463
EAQ79667.1
Probable S-layer related protein (precursor).
  
     0.459
EAQ80603.1
Hypothetical protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits.
  
     0.456
EAQ78949.1
Hypothetical protein; COG1225 Peroxiredoxin.
  
     0.416
EAQ80470.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.