STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ81116.1COG4864 Uncharacterized protein conserved in bacteria. (360 aa)    
Predicted Functional Partners:
EAQ77194.1
Hypothetical protein; COG1030 Membrane-bound serine protease (ClpP class).
 
    0.921
EAQ77195.1
Hypothetical protein; COG1030 Membrane-bound serine protease (ClpP class).
 
    0.920
EAQ81114.1
Hypothetical protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
       0.548
EAQ81115.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.548
EAQ80048.1
COG2268 Uncharacterized protein conserved in bacteria.
   
  
 0.432
EAQ81113.1
Hypothetical protein.
       0.402
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.