STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ81129.1COG1305 Transglutaminase-like enzymes, putative cysteine proteases. (1146 aa)    
Predicted Functional Partners:
EAQ81128.1
Hypothetical protein.
  
 0.982
EAQ81127.1
Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
    
0.807
EAQ77213.1
COG4307 Uncharacterized protein conserved in bacteria.
 
     0.733
EAQ77562.1
Transglutaminase-like domain protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
     0.726
EAQ81124.1
Hypothetical protein.
    0.605
EAQ81126.1
Hypothetical protein.
       0.605
EAQ81125.1
COG2307 Uncharacterized protein conserved in bacteria.
 
    0.522
EAQ81130.1
Hypothetical protein.
       0.400
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.