STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ79887.1Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase. (135 aa)    
Predicted Functional Partners:
EAQ78987.1
Saframycin Mx1 synthetase B; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
 
 0.850
EAQ81365.1
Saframycin Mx1 synthetase B; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
 
 0.850
EAQ79233.1
Acylglycerophosphoethanolamine acyltransferase; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
   0.847
EAQ82050.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
 
     0.791
EAQ81905.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.760
ybeY
Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.746
rpsQ
Probable 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.699
EAQ82042.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
     
 0.698
EAQ77553.1
Probable molybdopterin-synthase sulfurylase; COG0607 Rhodanese-related sulfurtransferase.
  
     0.680
EAQ77915.1
Molybdopterin oxidoreductase, iron sulfur subunit; COG0437 Fe-S-cluster-containing hydrogenase components 1.
    
 0.655
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.