STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ81247.1Hypothetical protein. (493 aa)    
Predicted Functional Partners:
EAQ78489.1
Hypothetical protein; COG1904 Glucuronate isomerase.
  
  
  0.799
EAQ82623.1
Sigma-70 factor; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); Belongs to the sigma-70 factor family.
  
     0.754
EAQ82122.1
Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); COG2755 Lysophospholipase L1 and related esterases.
    
 0.753
EAQ79079.1
COG1538 Outer membrane protein.
  
     0.736
EAQ78044.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.735
EAQ78746.1
Hypothetical protein.
  
     0.732
EAQ81778.1
Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component.
  
     0.724
EAQ78625.1
Hypothetical protein.
  
     0.721
EAQ82564.1
General secretory pathway protein D-like; COG1196 Chromosome segregation ATPases; Belongs to the bacterial secretin family.
  
     0.715
EAQ77358.1
Alkaline proteinase secretion protein aprE-like; COG0845 Membrane-fusion protein.
  
     0.710
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.