STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ81350.1Transcriptional regulator (IclR family protein); COG1414 Transcriptional regulator. (289 aa)    
Predicted Functional Partners:
EAQ77717.1
Hypothetical protein; COG3386 Gluconolactonase.
      0.902
EAQ76903.1
COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
    
  0.734
EAQ78438.1
COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.533
EAQ81349.1
Putative secreted protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division.
       0.533
EAQ81351.1
Hypothetical protein.
  
    0.476
EAQ81276.1
COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
  
  0.453
EAQ79944.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
    0.441
EAQ81931.1
Regulatory protein GntR, HTH:GntR, C-terminal; COG1802 Transcriptional regulators.
  
    0.427
EAQ78755.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
    0.425
EAQ78504.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
    0.418
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.