STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ79686.1COG1555 DNA uptake protein and related DNA-binding proteins. (146 aa)    
Predicted Functional Partners:
EAQ79233.1
Acylglycerophosphoethanolamine acyltransferase; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
    
  0.721
EAQ80069.1
2-acyl-glycerophospho-ethanolamine acyltransferase; COG0477 Permeases of the major facilitator superfamily.
    
  0.698
EAQ80038.1
Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein.
  
  
 0.639
EAQ77432.1
Probable competence protein; COG0658 Predicted membrane metal-binding protein.
  
  
 0.606
EAQ79685.1
COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
       0.604
EAQ80250.1
COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
   
  
 0.595
EAQ77441.1
Probable type 4 prepilin-like proteins leader peptide processing enzyme; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
   
  
 0.595
EAQ80004.1
Type IV fimbrial assembly protein PilC; COG1459 Type II secretory pathway, component PulF.
  
  
 0.563
EAQ77870.1
General secretion pathway protein F-putative pilus protein; COG1459 Type II secretory pathway, component PulF.
  
  
 0.563
EAQ79631.1
Type IV pilus biogenesis protein PilC; COG1459 Type II secretory pathway, component PulF.
  
  
 0.563
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.